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UBD ubiquitin D [ Bison bison bison ]

Gene ID: 104983086, updated on 12-Mar-2024

Summary

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Gene symbol
UBD
Gene description
ubiquitin D
See related
Ensembl:ENSBBBG00000016937
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See UBD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011491881.1 (3729..6182, complement)

NW_011491881.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 2H1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011491881.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to tumor necrosis factor IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to type II interferon IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011491881.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    3729..6182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010832571.1 → XP_010830873.1  ubiquitin D

    UniProtKB/TrEMBL
    A0A6P3GGU5
    Related
    ENSBBBP00000008905.1, ENSBBBT00000016730.1
    Conserved Domains (2) summary
    smart00213
    Location:5 → 76
    UBQ; Ubiquitin homologues
    cl00155
    Location:95 → 155
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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