U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

efnb1 ephrin-B1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104967673, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
efnb1
Gene description
ephrin-B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011370221.1 (122789..188974, complement)

NW_011370221.1Genomic Context describing neighboring genes Neighboring gene Ets2 repressor factor like 1 Neighboring gene cohesin subunit SA-2-like Neighboring gene cohesin subunit SA-2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_011370221.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ephrin-B1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011370221.1 Reference NC01 Primary Assembly

    Range
    122789..188974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010797187.1 → XP_010795489.1  ephrin-B1

    UniProtKB/TrEMBL
    A0A6I9Q5Q4
    Conserved Domains (1) summary
    cl19115
    Location:27 → 161
    Cupredoxin; Cupredoxin superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.