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abcf2 ATP binding cassette subfamily F member 2 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104954585, updated on 22-Oct-2023

Summary

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Gene symbol
abcf2
Gene description
ATP binding cassette subfamily F member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011356228.1 (492433..498313)

NW_011356228.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 Neighboring gene uncharacterized LOC104954586 Neighboring gene chondroitin polymerizing factor 2 Neighboring gene solute carrier family 4 member 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011356228.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family F member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011356228.1 Reference NC01 Primary Assembly

    Range
    492433..498313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010781727.1 → XP_010780029.1  ATP-binding cassette sub-family F member 2

    UniProtKB/TrEMBL
    A0A6I9NQI6
    Conserved Domains (3) summary
    cd03221
    Location:80 → 293
    ABCF_EF-3; ATP-binding cassette domain of elongation factor 3, subfamily F
    COG0488
    Location:77 → 583
    Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
    pfam12848
    Location:292 → 360
    ABC_tran_Xtn; ABC transporter
Nucleotide Protein
Heading Accession and Version

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