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dync2li1 dynein cytoplasmic 2 light intermediate chain 1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104954350, updated on 22-Oct-2023

Summary

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Gene symbol
dync2li1
Gene description
dynein cytoplasmic 2 light intermediate chain 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011355973.1 (7358..23588, complement)

NW_011355973.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein of 170 kDa protein B-like Neighboring gene uncharacterized LOC104954338 Neighboring gene LYR motif containing 7 Neighboring gene histidine triad nucleotide binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011355973.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein heavy chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport involved in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytoplasmic dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic dynein 2 light intermediate chain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011355973.1 Reference NC01 Primary Assembly

    Range
    7358..23588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010781444.1 → XP_010779746.1  cytoplasmic dynein 2 light intermediate chain 1

    UniProtKB/TrEMBL
    A0A6I9NZE2
    Conserved Domains (2) summary
    pfam15308
    Location:575 → 960
    CEP170_C; CEP170 C-terminus
    cl21455
    Location:36 → 222
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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