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galns galactosamine (N-acetyl)-6-sulfatase [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104947090, updated on 12-Mar-2024

Summary

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Gene symbol
galns
Gene description
galactosamine (N-acetyl)-6-sulfatase
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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See galns in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011333040.1 (15916624..15940239)

NW_011333040.1Genomic Context describing neighboring genes Neighboring gene PABPN1 like, cytoplasmic Neighboring gene trafficking protein particle complex subunit 2L Neighboring gene chemokine like factor Neighboring gene CKLF-like MARVEL transmembrane domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011333040.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arylsulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine-6-sulfatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011333040.1 Reference NC01 Primary Assembly

    Range
    15916624..15940239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010773047.1 → XP_010771349.1  N-acetylgalactosamine-6-sulfatase

    UniProtKB/TrEMBL
    A0A6I9MZY8
    Conserved Domains (2) summary
    COG3119
    Location:31 → 406
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    cd16157
    Location:34 → 500
    GALNS; galactosamine-6-sulfatase; also known as N-acetylgalactosamine-6-sulfatase (GALNS)

RNA

  1. XR_798522.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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