U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cnot4a CCR4-NOT transcription complex, subunit 4a [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104946799, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cnot4a
Gene description
CCR4-NOT transcription complex, subunit 4a
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Also known as
cnot4
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011344299.1 (160808..172567)

NW_011344299.1Genomic Context describing neighboring genes Neighboring gene interleukin-17 receptor A-like Neighboring gene uncharacterized LOC104946800 Neighboring gene potassium voltage-gated channel, shaker-related subfamily, member 1a Neighboring gene shaker-related potassium channel tsha2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_011344299.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CCR4-NOT transcription complex subunit 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011344299.1 Reference NC01 Primary Assembly

    Range
    160808..172567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010772684.1 → XP_010770986.1  CCR4-NOT transcription complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A6I9N9D4
    Conserved Domains (2) summary
    cd12438
    Location:104 → 201
    RRM_CNOT4; RNA recognition motif in Eukaryotic CCR4-NOT transcription complex subunit 4 (NOT4) and similar proteins
    pfam14570
    Location:14 → 60
    zf-RING_4; RING/Ubox like zinc-binding domain

  2. XM_010772685.1 → XP_010770987.1  CCR4-NOT transcription complex subunit 4 isoform X2

    UniProtKB/TrEMBL
    A0A6I9N319
    Conserved Domains (2) summary
    cd12438
    Location:104 → 201
    RRM_CNOT4; RNA recognition motif in Eukaryotic CCR4-NOT transcription complex subunit 4 (NOT4) and similar proteins
    pfam14570
    Location:14 → 60
    zf-RING_4; RING/Ubox like zinc-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.