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ssbp1 single-stranded DNA binding protein 1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104946467, updated on 12-Mar-2024

Summary

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Gene symbol
ssbp1
Gene description
single-stranded DNA binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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See ssbp1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011343826.1 (92196..103825)

NW_011343826.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C12orf56 homolog Neighboring gene acyl-coenzyme A thioesterase 1-like Neighboring gene cAMP responsive element binding protein 3-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011343826.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single-stranded DNA-binding protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011343826.1 Reference NC01 Primary Assembly

    Range
    92196..103825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010772305.1 → XP_010770607.1  single-stranded DNA-binding protein, mitochondrial

    UniProtKB/TrEMBL
    A0A6I9N1Z5
    Conserved Domains (2) summary
    COG0629
    Location:28 → 140
    Ssb; Single-stranded DNA-binding protein [Replication, recombination and repair]
    cl09930
    Location:26 → 140
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein
Heading Accession and Version

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