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mdh1 malate dehydrogenase 1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104942001, updated on 22-Oct-2023

Summary

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Gene symbol
mdh1
Gene description
malate dehydrogenase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011336800.1 (53362..59821)

NW_011336800.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 10 Neighboring gene UDP-glucose pyrophosphorylase 2b Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene orthodenticle homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011336800.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-malate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADH metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxaloacetate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malate dehydrogenase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011336800.1 Reference NC01 Primary Assembly

    Range
    53362..59821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010767186.1 → XP_010765488.1  malate dehydrogenase, cytoplasmic

    UniProtKB/TrEMBL
    A0A6I9MQF6
    Conserved Domains (2) summary
    cd01336
    Location:3 → 327
    MDH_cytoplasmic_cytosolic; Cytoplasmic and cytosolic Malate dehydrogenases
    PRK05442
    Location:1 → 332
    PRK05442; malate dehydrogenase; Provisional
Nucleotide Protein
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