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vps45 vacuolar protein sorting 45 homolog [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104936843, updated on 12-Mar-2024

Summary

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Gene symbol
vps45
Gene description
vacuolar protein sorting 45 homolog
Locus tag
EH28_03305
See related
Ensembl:ENSLCRG00005000714
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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See vps45 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
13
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XIII NC_040023.1 (11477534..11483521)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609312.1 (231978..236385, complement)

Chromosome XIII - NC_040023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113747308 Neighboring gene cocaine- and amphetamine-regulated transcript 4 Neighboring gene pleckstrin homology domain containing, family O member 1a Neighboring gene acidic (leucine-rich) nuclear phosphoprotein 32 family, member E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 45
Names
Vacuolar protein sorting-associated protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040023.1 Reference L_crocea_2.0 Primary Assembly

    Range
    11477534..11483521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027287018.1 → XP_027142819.1  vacuolar protein sorting-associated protein 45

    UniProtKB/TrEMBL
    A0A6G0HTJ6
    Related
    ENSLCRP00005001460.1, ENSLCRT00005001502.1
Nucleotide Protein
Heading Accession and Version

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