U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

brip1 BRCA1 interacting helicase 1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104930587, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
brip1
Gene description
BRCA1 interacting helicase 1
Locus tag
EH28_15432
See related
Ensembl:ENSLCRG00005002273
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: VII
Exon count:
26
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) VII NC_040017.1 (785495..893436)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017607990.1 (77891..117253)

Chromosome VII - NC_040017.1Genomic Context describing neighboring genes Neighboring gene transcription factor 7-like 1-A Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1Da Neighboring gene T-box transcription factor 4 Neighboring gene T-box transcription factor 2b Neighboring gene BCAS3 microtubule associated cell migration factor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair involved in meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Fanconi anemia group J protein
Names
BRCA1 interacting protein C-terminal helicase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040017.1 Reference L_crocea_2.0 Primary Assembly

    Range
    785495..893436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019269234.2 → XP_019124779.2  Fanconi anemia group J protein isoform X1

  2. XM_027280416.1 → XP_027136217.1  Fanconi anemia group J protein isoform X1

  3. XM_027280418.1 → XP_027136219.1  Fanconi anemia group J protein isoform X3

  4. XM_027280417.1 → XP_027136218.1  Fanconi anemia group J protein isoform X2

  5. XM_027280419.1 → XP_027136220.1  Fanconi anemia group J protein isoform X4

    Related
    ENSLCRP00005004430.1, ENSLCRT00005004618.1

  6. XM_027280420.1 → XP_027136221.1  Fanconi anemia group J protein isoform X5

  7. XM_027280421.1 → XP_027136222.1  Fanconi anemia group J protein isoform X6

  8. XM_019269228.2 → XP_019124773.1  Fanconi anemia group J protein isoform X7

    UniProtKB/TrEMBL
    A0A6G0IVZ4
    Related
    ENSLCRP00005004407.1, ENSLCRT00005004595.1
    Conserved Domains (3) summary
    TIGR00604
    Location:267 → 906
    rad3; DNA repair helicase (rad3)
    pfam03154
    Location:914 → 1127
    Atrophin-1; Atrophin-1 family
    cl28899
    Location:39 → 72
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.