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ttf2 transcription termination factor, RNA polymerase II [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104928666, updated on 12-Mar-2024

Summary

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Gene symbol
ttf2
Gene description
transcription termination factor, RNA polymerase II
Locus tag
EH28_15325
See related
Ensembl:ENSLCRG00005001158
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: XVIII
Exon count:
24
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XVIII NC_040028.1 (4192285..4202491)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609508.1 (197526..207751)

Chromosome XVIII - NC_040028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113748240 Neighboring gene ring finger protein 17 Neighboring gene centromere protein J Neighboring gene M-phase phosphoprotein 8 Neighboring gene zinc finger, MYM-type 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription termination factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040028.1 Reference L_crocea_2.0 Primary Assembly

    Range
    4192285..4202491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027291192.1 → XP_027146993.1  transcription termination factor 2 isoform X1

    Related
    ENSLCRP00005002371.1, ENSLCRT00005002433.1

  2. XM_027291193.1 → XP_027146994.1  transcription termination factor 2 isoform X2

    Related
    ENSLCRP00005002356.1, ENSLCRT00005002418.1

  3. XM_027291194.1 → XP_027146995.1  transcription termination factor 2 isoform X3

    Related
    ENSLCRP00005002398.1, ENSLCRT00005002461.1
Nucleotide Protein
Heading Accession and Version

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