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chst3b carbohydrate (chondroitin 6) sulfotransferase 3b [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104927742, updated on 12-Mar-2024

Summary

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Gene symbol
chst3b
Gene description
carbohydrate (chondroitin 6) sulfotransferase 3b
Locus tag
EH28_03479
See related
Ensembl:ENSLCRG00005004565
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
chst3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: XVI
Exon count:
3
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XVI NC_040026.1 (16177468..16184288)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609754.1 (121419..128399)

Chromosome XVI - NC_040026.1Genomic Context describing neighboring genes Neighboring gene cadherin-related family member 1 Neighboring gene growth hormone inducible transmembrane protein Neighboring gene paired box 2b Neighboring gene F-box and leucine-rich repeat protein 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040026.1 Reference L_crocea_2.0 Primary Assembly

    Range
    16177468..16184288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010741927.3 → XP_010740229.2  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    A0A6G0HXZ4
    Related
    ENSLCRP00005009839.1, ENSLCRT00005010127.1
Nucleotide Protein
Heading Accession and Version

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