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vegfab vascular endothelial growth factor Ab [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104925623, updated on 12-Mar-2024

Summary

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Gene symbol
vegfab
Gene description
vascular endothelial growth factor Ab
Locus tag
EH28_09673
See related
Ensembl:ENSLCRG00005013020
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
vegfa
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: XI
Exon count:
8
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XI NC_040021.1 (12950394..12964219, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608422.1 (496360..510461)

Chromosome XI - NC_040021.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene alpha-N-acetylgalactosaminidase Neighboring gene uncharacterized LOC113746838 Neighboring gene mitochondrial ribosomal protein S18A Neighboring gene radial spoke head component 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemoattractant activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vascular endothelial growth factor receptor 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in induction of positive chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mast cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vascular endothelial growth factor A-A
Names
vascular endothelial growth factor A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040021.1 Reference L_crocea_2.0 Primary Assembly

    Range
    12950394..12964219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010739287.3 → XP_010737589.1  vascular endothelial growth factor A-A isoform X1

    Related
    ENSLCRP00005033041.1, ENSLCRT00005033685.1
    Conserved Domains (2) summary
    pfam00341
    Location:45 → 123
    PDGF; PDGF/VEGF domain
    pfam14554
    Location:159 → 213
    VEGF_C; VEGF heparin-binding domain

  2. XM_010739288.3 → XP_010737590.1  vascular endothelial growth factor A-A isoform X2

    UniProtKB/TrEMBL
    A0A6G0I659
    Related
    ENSLCRP00005033057.1, ENSLCRT00005033701.1
    Conserved Domains (2) summary
    pfam14554
    Location:140 → 188
    VEGF_C; VEGF heparin-binding domain
    pfam00341
    Location:45 → 123
    PDGF; PDGF/VEGF domain
Nucleotide Protein
Heading Accession and Version

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