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aif1l allograft inflammatory factor 1-like [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104924920, updated on 12-Mar-2024

Summary

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Gene symbol
aif1l
Gene description
allograft inflammatory factor 1-like
Locus tag
EH28_20273
See related
Ensembl:ENSLCRG00005004774
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: IX
Exon count:
6
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) IX NC_040019.1 (3352706..3364953, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608981.1 (1603145..1615391)

Chromosome IX - NC_040019.1Genomic Context describing neighboring genes Neighboring gene histone H3.3 Neighboring gene proteasome 20S subunit beta 10 Neighboring gene laminin, gamma 3 Neighboring gene fibrinogen C domain containing 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ruffle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
allograft inflammatory factor 1-like
Names
Allograft inflammatory factor 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040019.1 Reference L_crocea_2.0 Primary Assembly

    Range
    3352706..3364953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010738411.3 → XP_010736713.1  allograft inflammatory factor 1-like

    See identical proteins and their annotated locations for XP_010736713.1

    Related
    ENSLCRP00005010423.1, ENSLCRT00005010716.1
    Conserved Domains (1) summary
    cl08302
    Location:57 → 110
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
Heading Accession and Version

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