U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zgc:154046 Carnitine O-acetyltransferase-like [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104923081, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
zgc:154046
Gene description
Carnitine O-acetyltransferase-like
Locus tag
EH28_17290
See related
Ensembl:ENSLCRG00005005385
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
crat
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See zgc:154046 in Genome Data Viewer
Location:
chromosome: III
Exon count:
14
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) III NC_040013.1 (2841018..2846847, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609343.1 (498952..504791)

Chromosome III - NC_040013.1Genomic Context describing neighboring genes Neighboring gene neuronal calcium sensor 1b Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 13 Neighboring gene immediate early response gene 5-like protein Neighboring gene ankyrin repeat and SOCS box containing 6

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process, CoA-linked IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carnitine O-acetyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040013.1 Reference L_crocea_2.0 Primary Assembly

    Range
    2841018..2846847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010736068.3 → XP_010734370.3  carnitine O-acetyltransferase

    UniProtKB/TrEMBL
    A0A6G0IMC5
    Related
    ENSLCRP00005015595.1, ENSLCRT00005015937.1
    Conserved Domains (1) summary
    pfam00755
    Location:38 → 617
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.