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cnep1r1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104920762, updated on 12-Mar-2024

Summary

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Gene symbol
cnep1r1
Gene description
CTD nuclear envelope phosphatase 1 regulatory subunit 1
Locus tag
EH28_18413
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: VIII
Exon count:
6
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) VIII NC_040018.1 (22910220..22913922, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609325.1 (947480..951161, complement)

Chromosome VIII - NC_040018.1Genomic Context describing neighboring genes Neighboring gene terminal nucleotidyltransferase 4B Neighboring gene HEAT repeat containing 3 Neighboring gene arylamine N-acetyltransferase, pineal gland isozyme NAT-10-like Neighboring gene arylamine N-acetyltransferase, pineal gland isozyme NAT-10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Nem1-Spo7 phosphatase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear envelope phosphatase-regulatory subunit 1
Names
Nuclear envelope phosphatase-regulatory subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040018.1 Reference L_crocea_2.0 Primary Assembly

    Range
    22910220..22913922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010733126.3 → XP_010731428.1  nuclear envelope phosphatase-regulatory subunit 1 isoform X2

    See identical proteins and their annotated locations for XP_010731428.1

    Conserved Domains (1) summary
    pfam09771
    Location:5 → 122
    Tmemb_18A; Transmembrane protein 188

  2. XM_027280996.1 → XP_027136797.1  nuclear envelope phosphatase-regulatory subunit 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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