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Slc48a1 solute carrier family 48 member 1 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104872174, updated on 12-Mar-2024

Summary

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Gene symbol
Slc48a1
Gene description
solute carrier family 48 member 1
Locus tag
H920_11348
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900927.1 (6510522..6514006, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045581.1 (811369..814166, complement)

NW_022900927.1Genomic Context describing neighboring genes Neighboring gene vitamin D receptor Neighboring gene histone deacetylase 7 Neighboring gene uncharacterized LOC117286135 Neighboring gene Rap guanine nucleotide exchange factor 3 Neighboring gene endonuclease, poly(U) specific

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heme transporter HRG1
Names
Heme transporter HRG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900927.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    6510522..6514006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010638340.3 → XP_010636642.2  heme transporter HRG1

    Conserved Domains (1) summary
    pfam16954
    Location:71 → 121
    HRG; Haem-transporter, endosomal/lysosomal, haem-responsive gene
Nucleotide Protein
Heading Accession and Version

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