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Rcan3 RCAN family member 3 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104868796, updated on 12-Mar-2024

Summary

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Gene symbol
Rcan3
Gene description
RCAN family member 3
Locus tag
H920_00897
See related
Ensembl:ENSFDAG00000018927
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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See Rcan3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900935.1 (21384766..21421936, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011043357.1 (4118929..4156168, complement)

NW_022900935.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104868788 Neighboring gene uncharacterized LOC104868781 Neighboring gene U6 spliceosomal RNA Neighboring gene NIPA like domain containing 3 Neighboring gene 60S ribosomal protein L29-like Neighboring gene sperm tail PG-rich repeat containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent protein serine/threonine phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcipressin-3
Names
Calcipressin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900935.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    21384766..21421936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010633756.2 → XP_010632058.1  calcipressin-3 isoform X1

    See identical proteins and their annotated locations for XP_010632058.1

    Conserved Domains (1) summary
    cl17169
    Location:84 → 202
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_010633775.3 → XP_010632077.1  calcipressin-3 isoform X3

    Conserved Domains (1) summary
    cl17169
    Location:58 → 181
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_010633766.3 → XP_010632068.1  calcipressin-3 isoform X1

    See identical proteins and their annotated locations for XP_010632068.1

    Conserved Domains (1) summary
    cl17169
    Location:84 → 202
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_010633771.3 → XP_010632073.1  calcipressin-3 isoform X2

    Related
    ENSFDAP00000011348.1
    Conserved Domains (1) summary
    pfam04847
    Location:84 → 245
    Calcipressin; Calcipressin

  5. XM_010633779.3 → XP_010632081.1  calcipressin-3 isoform X4

    See identical proteins and their annotated locations for XP_010632081.1

    UniProtKB/TrEMBL
    A0A091E5B1
    Related
    ENSFDAP00000011353.1
    Conserved Domains (1) summary
    pfam04847
    Location:58 → 224
    Calcipressin; Calcipressin
Nucleotide Protein
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