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Atg101 autophagy related 101 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104865183, updated on 12-Mar-2024

Summary

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Gene symbol
Atg101
Gene description
autophagy related 101
Locus tag
H920_07175
See related
Ensembl:ENSFDAG00000017982
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900927.1 (18478713..18484915)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044894.1 (2295572..2301711)

NW_022900927.1Genomic Context describing neighboring genes Neighboring gene signal peptidase complex subunit 2-like Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene small integral membrane protein 41 Neighboring gene uncharacterized LOC104865185

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 101
Names
Autophagy-related protein 101

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900927.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    18478713..18484915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010628593.3 → XP_010626895.1  autophagy-related protein 101

    See identical proteins and their annotated locations for XP_010626895.1

    UniProtKB/TrEMBL
    A0A091DH17
    Related
    ENSFDAP00000010147.1
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  2. XM_010628592.3 → XP_010626894.1  autophagy-related protein 101

    See identical proteins and their annotated locations for XP_010626894.1

    UniProtKB/TrEMBL
    A0A091DH17
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  3. XM_010628594.3 → XP_010626896.1  autophagy-related protein 101

    See identical proteins and their annotated locations for XP_010626896.1

    UniProtKB/TrEMBL
    A0A091DH17
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  4. XM_010628591.3 → XP_010626893.1  autophagy-related protein 101

    See identical proteins and their annotated locations for XP_010626893.1

    UniProtKB/TrEMBL
    A0A091DH17
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101
Nucleotide Protein
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