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Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104864618, updated on 12-Mar-2024

Summary

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Gene symbol
Acap3
Gene description
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
See related
Ensembl:ENSFDAG00000005455
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900935.1 (45351460..45363678)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044859.1 (316190..328400, complement)

NW_022900935.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 11 Neighboring gene pseudouridine synthase like 1 Neighboring gene sodium channel epithelial 1 subunit delta Neighboring gene ubiquitin conjugating enzyme E2 J2 Neighboring gene RNA-binding motif protein, X-linked 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900935.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    45351460..45363678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010627691.3 → XP_010625993.1  LOW QUALITY PROTEIN: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3

    Related
    ENSFDAP00000016769.1
    Conserved Domains (7) summary
    cd00204
    Location:629 → 744
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd13250
    Location:229 → 325
    PH_ACAP; ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain
    pfam00169
    Location:227 → 321
    PH; PH domain
    pfam01412
    Location:361 → 479
    ArfGap; Putative GTPase activating protein for Arf
    pfam12796
    Location:629 → 722
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:658 → 689
    ANK; ANK repeat [structural motif]
    cl12013
    Location:1 → 173
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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