U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ppargc1b PPARG coactivator 1 beta [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104864359, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Ppargc1b
Gene description
PPARG coactivator 1 beta
Locus tag
H920_06569
See related
Ensembl:ENSFDAG00000008719
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900915.1 (8642512..8733814, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044840.1 (5786151..5877453)

NW_022900915.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 6A Neighboring gene solute carrier family 26 member 2 Neighboring gene eukaryotic peptide chain release factor subunit 1-like Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene Rho guanine nucleotide exchange factor 37

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Names
Peroxisome proliferator-activated receptor gamma coactivator 1-beta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900915.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    8642512..8733814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033765544.1 → XP_033621435.1  peroxisome proliferator-activated receptor gamma coactivator 1-beta

    UniProtKB/TrEMBL
    A0A091DNY5
    Conserved Domains (1) summary
    cl17169
    Location:934 → 1030
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.