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Fbln5 fibulin 5 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104856811, updated on 12-Mar-2024

Summary

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Gene symbol
Fbln5
Gene description
fibulin 5
Locus tag
H920_20367
See related
Ensembl:ENSFDAG00000015791
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Also known as
Fibulin-5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900933.1 (31378357..31450249, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011048078.1 (9332746..9404650, complement)

NW_022900933.1Genomic Context describing neighboring genes Neighboring gene cation channel sperm associated auxiliary subunit beta Neighboring gene tandem C2 domains, nuclear Neighboring gene uncharacterized LOC104856812 Neighboring gene alpha-1-antiproteinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibulin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900933.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    31378357..31450249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010616319.3 → XP_010614621.1  fibulin-5 isoform X1

    UniProtKB/TrEMBL
    A0A091CIM4
    Conserved Domains (4) summary
    smart00179
    Location:220 → 258
    EGF_CA; Calcium-binding EGF-like domain
    pfam12662
    Location:200 → 223
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:271 → 299
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:134 → 178
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_010616320.3 → XP_010614622.1  fibulin-5 isoform X2

    UniProtKB/TrEMBL
    A0A091CIM4
    Related
    ENSFDAP00000007227.1
    Conserved Domains (4) summary
    smart00179
    Location:207 → 245
    EGF_CA; Calcium-binding EGF-like domain
    pfam12662
    Location:187 → 210
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:258 → 286
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:121 → 165
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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