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Ccdc39 coiled-coil domain 39 molecular ruler complex subunit [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104856743, updated on 12-Mar-2024

Summary

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Gene symbol
Ccdc39
Gene description
coiled-coil domain 39 molecular ruler complex subunit
Locus tag
H920_20324
See related
Ensembl:ENSFDAG00000005792
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900924.1 (40649624..40687536, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011048068.1 (552446..591399, complement)

NW_022900924.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104856740 Neighboring gene tetratricopeptide repeat domain 14 Neighboring gene uncharacterized LOC109117802 Neighboring gene uncharacterized LOC104856744

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inner dynein arm assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 39
Names
Coiled-coil domain-containing protein 39
coiled-coil domain containing 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900924.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    40649624..40687536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019206343.2 → XP_019061888.1  coiled-coil domain-containing protein 39 isoform X1

    UniProtKB/TrEMBL
    A0A091CIN1

  2. XM_019206344.2 → XP_019061889.1  coiled-coil domain-containing protein 39 isoform X2

    Related
    ENSFDAP00000017176.1

  3. XM_019206345.2 → XP_019061890.1  coiled-coil domain-containing protein 39 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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