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Acer3 alkaline ceramidase 3 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104855472, updated on 12-Mar-2024

Summary

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Gene symbol
Acer3
Gene description
alkaline ceramidase 3
Locus tag
H920_00183
See related
Ensembl:ENSFDAG00000013786
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900928.1 (30095083..30218867)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011043124.1 (1220330..1343034)

NW_022900928.1Genomic Context describing neighboring genes Neighboring gene vomeronasal type-1 receptor 43-like Neighboring gene vomeronasal type-1 receptor 90-like Neighboring gene U6 spliceosomal RNA Neighboring gene ER membrane protein complex subunit 4-like Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene calpain 5 Neighboring gene olfactory marker protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phytoceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900928.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    30095083..30218867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010614359.3 → XP_010612661.1  alkaline ceramidase 3 isoform X1

    Related
    ENSFDAP00000004596.1
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 259
    Ceramidase; Ceramidase

  2. XM_033764232.1 → XP_033620123.1  alkaline ceramidase 3 isoform X2

    Conserved Domains (1) summary
    pfam05875
    Location:1 → 164
    Ceramidase
Nucleotide Protein
Heading Accession and Version

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