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Fblim1 filamin binding LIM protein 1 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104855344, updated on 12-Mar-2024

Summary

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Gene symbol
Fblim1
Gene description
filamin binding LIM protein 1
Locus tag
H920_19427
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900935.1 (1375394..1392147)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011047775.1 (124907..141685)

NW_022900935.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 34 Neighboring gene transmembrane protein 82 Neighboring gene uncharacterized LOC109117743 Neighboring gene spen family transcriptional repressor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables filamin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
filamin-binding LIM protein 1
Names
Filamin-binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900935.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    1375394..1392147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010614165.3 → XP_010612467.1  filamin-binding LIM protein 1

    Conserved Domains (3) summary
    cd09357
    Location:286 → 347
    LIM3_Zyxin_like; The third LIM domain of Zyxin-like family
    cd08368
    Location:166 → 219
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl02475
    Location:226 → 278
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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