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Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104850688, updated on 12-Mar-2024

Summary

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Gene symbol
Pcmt1
Gene description
protein-L-isoaspartate (D-aspartate) O-methyltransferase
See related
Ensembl:ENSFDAG00000020822
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900926.1 (33353699..33425890, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046749.1 (603724..675891)

NW_022900926.1Genomic Context describing neighboring genes Neighboring gene lysine-rich coiled-coil protein 1-like Neighboring gene protein FAM136A-like Neighboring gene LDL receptor related protein 11 Neighboring gene U6 spliceosomal RNA Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene nucleoporin 43

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-L-isoaspartate(D-aspartate) O-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900926.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    33353699..33425890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010607734.3 → XP_010606036.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X3

    Related
    ENSFDAP00000022414.1
    Conserved Domains (2) summary
    pfam01135
    Location:8 → 216
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
    cl17173
    Location:13 → 220
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_019205070.2 → XP_019060615.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1

    Related
    ENSFDAP00000022413.1

  3. XM_033763315.1 → XP_033619206.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X2

    Conserved Domains (1) summary
    pfam01135
    Location:8 → 216
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Nucleotide Protein
Heading Accession and Version

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