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Sap18 Sin3A associated protein 18 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104850509, updated on 12-Mar-2024

Summary

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Gene symbol
Sap18
Gene description
Sin3A associated protein 18
Locus tag
H920_16411
See related
Ensembl:ENSFDAG00000011498
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900950.1 (26046345..26052173)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046719.1 (2891868..2897343, complement)

NW_022900950.1Genomic Context describing neighboring genes Neighboring gene probable phospholipid-transporting ATPase IF Neighboring gene large tumor suppressor kinase 2 Neighboring gene uncharacterized LOC104850508 Neighboring gene uncharacterized LOC104850506 Neighboring gene U6 spliceosomal RNA Neighboring gene spindle and kinetochore associated complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP18
Names
Histone deacetylase complex subunit SAP18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900950.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    26046345..26052173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010607495.3 → XP_010605797.1  histone deacetylase complex subunit SAP18

    Related
    ENSFDAP00000001559.1
    Conserved Domains (1) summary
    pfam06487
    Location:43 → 156
    SAP18; Sin3 associated polypeptide p18 (SAP18)
Nucleotide Protein
Heading Accession and Version

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