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Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104849330, updated on 12-Mar-2024

Summary

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Gene symbol
Adamts10
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900949.1 (3635097..3653201, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046479.1 (1003231..1021333, complement)

NW_022900949.1Genomic Context describing neighboring genes Neighboring gene cytoplasmic protein NCK1-like Neighboring gene myosin IF Neighboring gene NFIL3 like basic leucine zipper Neighboring gene putative methyl-CpG-binding domain protein 3-like 5 Neighboring gene uncharacterized LOC104849307

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900949.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    3635097..3653201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033759422.1 → XP_033615313.1  A disintegrin and metalloproteinase with thrombospondin motifs 10

    Conserved Domains (6) summary
    smart00209
    Location:706 → 737
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:368 → 583
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:841 → 937
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam01562
    Location:174 → 309
    Pep_M12B_propep; Reprolysin family propeptide
    pfam08686
    Location:989 → 1021
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:598 → 622
    ADAM_CR_2; ADAM cysteine-rich domain
Nucleotide Protein
Heading Accession and Version

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