U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRIOBP TRIO and F-actin binding protein [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104842824, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRIOBP
Gene description
TRIO and F-actin binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRIOBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972537.1 (3233066..3255890)

NW_010972537.1Genomic Context describing neighboring genes Neighboring gene arf-GAP with dual PH domain-containing protein 1-like Neighboring gene nucleolar protein 12 Neighboring gene histone H5 Neighboring gene glycine C-acetyltransferase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010972537.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TRIO and F-actin-binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972537.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    3233066..3255890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010585439.1 → XP_010583741.1  TRIO and F-actin-binding protein isoform X2

    Conserved Domains (5) summary
    cd13275
    Location:716 → 817
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    pfam00169
    Location:716 → 809
    PH; PH domain
    pfam09789
    Location:968 → 1168
    DUF2353; Uncharacterized coiled-coil protein (DUF2353)
    pfam15456
    Location:999 → 1071
    Uds1; Up-regulated During Septation
    pfam16214
    Location:378 → 523
    AC_N; Adenylyl cyclase N-terminal extracellular and transmembrane region

  2. XM_010585440.1 → XP_010583742.1  TRIO and F-actin-binding protein isoform X3

    Conserved Domains (5) summary
    cd13275
    Location:716 → 817
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    pfam00169
    Location:716 → 809
    PH; PH domain
    pfam09789
    Location:968 → 1168
    DUF2353; Uncharacterized coiled-coil protein (DUF2353)
    pfam15456
    Location:999 → 1071
    Uds1; Up-regulated During Septation
    pfam16214
    Location:378 → 523
    AC_N; Adenylyl cyclase N-terminal extracellular and transmembrane region

  3. XM_010585438.1 → XP_010583740.1  TRIO and F-actin-binding protein isoform X1

    Conserved Domains (6) summary
    cd13275
    Location:716 → 817
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    pfam00169
    Location:716 → 809
    PH; PH domain
    pfam15456
    Location:999 → 1071
    Uds1; Up-regulated During Septation
    pfam15619
    Location:1001 → 1196
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
    pfam16214
    Location:378 → 523
    AC_N; Adenylyl cyclase N-terminal extracellular and transmembrane region
    cl23720
    Location:1176 → 1283
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

  4. XM_010585441.1 → XP_010583743.1  TRIO and F-actin-binding protein isoform X4

    Conserved Domains (6) summary
    cd13275
    Location:592 → 693
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    pfam00169
    Location:592 → 685
    PH; PH domain
    pfam15456
    Location:875 → 947
    Uds1; Up-regulated During Septation
    pfam15619
    Location:877 → 1072
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
    pfam16214
    Location:254 → 399
    AC_N; Adenylyl cyclase N-terminal extracellular and transmembrane region
    cl23720
    Location:1052 → 1159
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

  5. XM_010585444.1 → XP_010583746.1  TRIO and F-actin-binding protein isoform X6

    Conserved Domains (2) summary
    cd13275
    Location:1 → 98
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    pfam00169
    Location:7 → 90
    PH; PH domain

  6. XM_010585442.1 → XP_010583744.1  TRIO and F-actin-binding protein isoform X5

    Conserved Domains (2) summary
    cd13275
    Location:14 → 115
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    pfam00169
    Location:14 → 107
    PH; PH domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.