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MATR3 matrin 3 [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104839052, updated on 12-Mar-2024

Summary

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Gene symbol
MATR3
Gene description
matrin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010973092.1 (19886785..19906813)

NW_010973092.1Genomic Context describing neighboring genes Neighboring gene SIL1 nucleotide exchange factor Neighboring gene uncharacterized LOC104839051 Neighboring gene poly(A) binding protein interacting protein 2 Neighboring gene solute carrier family 23 member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010973092.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010973092.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    19886785..19906813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010579168.1 → XP_010577470.1  matrin-3 isoform X2

    See identical proteins and their annotated locations for XP_010577470.1

    Conserved Domains (3) summary
    smart00451
    Location:522 → 556
    ZnF_U1; U1-like zinc finger
    cd12714
    Location:57 → 132
    RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3
    cd12715
    Location:156 → 235
    RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3

  2. XM_010579164.1 → XP_010577466.1  matrin-3 isoform X1

    See identical proteins and their annotated locations for XP_010577466.1

    Conserved Domains (3) summary
    smart00451
    Location:853 → 887
    ZnF_U1; U1-like zinc finger
    cd12714
    Location:388 → 463
    RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3
    cd12715
    Location:487 → 566
    RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3

  3. XM_010579165.1 → XP_010577467.1  matrin-3 isoform X1

    See identical proteins and their annotated locations for XP_010577467.1

    Conserved Domains (3) summary
    smart00451
    Location:853 → 887
    ZnF_U1; U1-like zinc finger
    cd12714
    Location:388 → 463
    RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3
    cd12715
    Location:487 → 566
    RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3

  4. XM_010579166.1 → XP_010577468.1  matrin-3 isoform X1

    See identical proteins and their annotated locations for XP_010577468.1

    Conserved Domains (3) summary
    smart00451
    Location:853 → 887
    ZnF_U1; U1-like zinc finger
    cd12714
    Location:388 → 463
    RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3
    cd12715
    Location:487 → 566
    RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3

  5. XM_010579167.1 → XP_010577469.1  matrin-3 isoform X2

    See identical proteins and their annotated locations for XP_010577469.1

    Conserved Domains (3) summary
    smart00451
    Location:522 → 556
    ZnF_U1; U1-like zinc finger
    cd12714
    Location:57 → 132
    RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3
    cd12715
    Location:156 → 235
    RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3
Nucleotide Protein
Heading Accession and Version

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