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EFEMP1 EGF containing fibulin extracellular matrix protein 1 [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104836326, updated on 12-Mar-2024

Summary

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Gene symbol
EFEMP1
Gene description
EGF containing fibulin extracellular matrix protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972886.1 (17515040..17564060)

NW_010972886.1Genomic Context describing neighboring genes Neighboring gene FA complementation group L Neighboring gene VRK serine/threonine kinase 2 Neighboring gene coiled-coil domain containing 85A Neighboring gene polyribonucleotide nucleotidyltransferase 1 Neighboring gene protein phosphatase 4 regulatory subunit 3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972886.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF-containing fibulin-like extracellular matrix protein 1
Names
EGF containing fibulin like extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972886.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    17515040..17564060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010574851.1 → XP_010573153.1  EGF-containing fibulin-like extracellular matrix protein 1

    See identical proteins and their annotated locations for XP_010573153.1

    Conserved Domains (4) summary
    smart00179
    Location:172 → 202
    EGF_CA; Calcium-binding EGF-like domain
    pfam07645
    Location:131 → 168
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:192 → 215
    cEGF; Complement Clr-like EGF-like
    cl00057
    Location:250 → 282
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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