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DNMT1 DNA methyltransferase 1 [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104832602, updated on 11-Apr-2024

Summary

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Gene symbol
DNMT1
Gene description
DNA methyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972696.1 (257000..270721, complement)

NW_010972696.1Genomic Context describing neighboring genes Neighboring gene collagen type V alpha 3 chain Neighboring gene uncharacterized LOC104832601 Neighboring gene eukaryotic translation initiation factor 3 subunit G Neighboring gene sphingosine-1-phosphate receptor 2 Neighboring gene mitochondrial ribosomal protein L4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972696.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA (cytosine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA (cytosine-5)-methyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972696.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    257000..270721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010568858.1 → XP_010567160.1  DNA (cytosine-5)-methyltransferase 1

    Conserved Domains (6) summary
    COG0270
    Location:1063 → 1516
    Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
    cd04711
    Location:886 → 1022
    BAH_Dnmt1_II; BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
    cd04760
    Location:675 → 798
    BAH_Dnmt1_I; BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG ...
    pfam02008
    Location:567 → 612
    zf-CXXC; CXXC zinc finger domain
    pfam06464
    Location:41 → 120
    DMAP_binding; DMAP1-binding Domain
    pfam12047
    Location:319 → 454
    DNMT1-RFD; Cytosine specific DNA methyltransferase replication foci domain
Nucleotide Protein
Heading Accession and Version

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