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LSAMP limbic system associated membrane protein [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104831688, updated on 12-Mar-2024

Summary

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Gene symbol
LSAMP
Gene description
limbic system associated membrane protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972664.1 (18940090..19944531, complement)

NW_010972664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104831687 Neighboring gene growth associated protein 43 Neighboring gene immunoglobulin superfamily member 11 Neighboring gene uroplakin 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972664.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
limbic system-associated membrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972664.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    18940090..19944531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010567434.1 → XP_010565736.1  limbic system-associated membrane protein isoform X5

    See identical proteins and their annotated locations for XP_010565736.1

    Conserved Domains (4) summary
    smart00408
    Location:229 → 294
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:221 → 303
    IG_like; Immunoglobulin like
    pfam07679
    Location:129 → 212
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:35 → 125
    Ig; Immunoglobulin domain

  2. XM_010567433.1 → XP_010565735.1  limbic system-associated membrane protein isoform X4

    See identical proteins and their annotated locations for XP_010565735.1

    Conserved Domains (4) summary
    smart00408
    Location:232 → 297
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:224 → 306
    IG_like; Immunoglobulin like
    pfam07679
    Location:132 → 215
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:38 → 128
    Ig; Immunoglobulin domain

  3. XM_010567431.1 → XP_010565733.1  limbic system-associated membrane protein isoform X2

    See identical proteins and their annotated locations for XP_010565733.1

    Conserved Domains (4) summary
    smart00408
    Location:232 → 297
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:224 → 306
    IG_like; Immunoglobulin like
    pfam07679
    Location:132 → 215
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:38 → 128
    Ig; Immunoglobulin domain

  4. XM_010567432.1 → XP_010565734.1  limbic system-associated membrane protein isoform X3

    See identical proteins and their annotated locations for XP_010565734.1

    Conserved Domains (3) summary
    cd00096
    Location:235 → 239
    Ig; Ig strand B [structural motif]
    pfam13927
    Location:218 → 294
    Ig_3; Immunoglobulin domain
    cl11960
    Location:38 → 128
    Ig; Immunoglobulin domain

  5. XM_010567430.1 → XP_010565732.1  limbic system-associated membrane protein isoform X1

    See identical proteins and their annotated locations for XP_010565732.1

    Conserved Domains (3) summary
    cd00096
    Location:235 → 239
    Ig; Ig strand B [structural motif]
    pfam13927
    Location:218 → 294
    Ig_3; Immunoglobulin domain
    cl11960
    Location:38 → 128
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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