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COLEC11 collectin subfamily member 11 [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104831256, updated on 12-Mar-2024

Summary

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Gene symbol
COLEC11
Gene description
collectin subfamily member 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972653.1 (8746054..8773316, complement)

NW_010972653.1Genomic Context describing neighboring genes Neighboring gene cytidine/uridine monophosphate kinase 2 Neighboring gene SRY-box transcription factor 11 Neighboring gene ribonuclease H1 Neighboring gene ribosomal protein S7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972653.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972653.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    8746054..8773316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010566706.1 → XP_010565008.1  collectin-11 isoform X1

    See identical proteins and their annotated locations for XP_010565008.1

    Conserved Domains (2) summary
    cd03591
    Location:151 → 266
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:41 → 97
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_010566709.1 → XP_010565011.1  collectin-11 isoform X4

    See identical proteins and their annotated locations for XP_010565011.1

    Conserved Domains (1) summary
    cd03591
    Location:103 → 218
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)

  3. XM_010566707.1 → XP_010565009.1  collectin-11 isoform X2

    See identical proteins and their annotated locations for XP_010565009.1

    Conserved Domains (1) summary
    cd03591
    Location:127 → 242
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)

  4. XM_010566708.1 → XP_010565010.1  collectin-11 isoform X3

    See identical proteins and their annotated locations for XP_010565010.1

    Conserved Domains (2) summary
    cd03591
    Location:127 → 242
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:40 → 74
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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