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ITGB1 integrin subunit beta 1 [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104828960, updated on 12-Mar-2024

Summary

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Gene symbol
ITGB1
Gene description
integrin subunit beta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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See ITGB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972436.1 (14335906..14363533, complement)

NW_010972436.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 5B Neighboring gene enhancer of polycomb homolog 1 Neighboring gene neuropilin 1 Neighboring gene par-3 family cell polarity regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972436.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-X3-C chemokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables collagen binding involved in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fibronectin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972436.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    14335906..14363533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010562971.1 → XP_010561273.1  integrin beta-1

    Conserved Domains (3) summary
    pfam00362
    Location:52 → 483
    Integrin_beta; Integrin, beta chain
    pfam07965
    Location:659 → 746
    Integrin_B_tail; Integrin beta tail domain
    pfam08725
    Location:776 → 814
    Integrin_b_cyt; Integrin beta cytoplasmic domain
Nucleotide Protein
Heading Accession and Version

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