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RAB3IP RAB3A interacting protein [ Corvus cornix cornix ]

Gene ID: 104698382, updated on 12-Mar-2024

Summary

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Gene symbol
RAB3IP
Gene description
RAB3A interacting protein
See related
EnsemblRapid:ENSCCCG00025010875
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See RAB3IP in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
12
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 1A NC_047057.1 (34737806..34770894)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010958998.1 (11333166..11357919)

Chromosome 1A - NC_047057.1Genomic Context describing neighboring genes Neighboring gene cathepsin E-like Neighboring gene bestrophin 3 Neighboring gene myelin regulatory factor like Neighboring gene uncharacterized LOC120411998

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi to plasma membrane transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab-3A-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_047057.1 Reference ASM73873v5 Primary Assembly

    Range
    34737806..34770894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039570869.1 → XP_039426803.1  rab-3A-interacting protein isoform X1

    Related
    ENSCCCP00025018780.1, ENSCCCT00025022311.1
    Conserved Domains (2) summary
    pfam06428
    Location:174 → 242
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:267 → 459
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  2. XM_039570871.1 → XP_039426805.1  rab-3A-interacting protein isoform X2

    Related
    ENSCCCP00025018808.1, ENSCCCT00025022340.1
    Conserved Domains (2) summary
    pfam08614
    Location:161 → 210
    ATG16; Autophagy protein 16 (ATG16)
    cd21068
    Location:235 → 427
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  3. XM_039570870.1 → XP_039426804.1  rab-3A-interacting protein isoform X1

    Related
    ENSCCCP00025018797.1, ENSCCCT00025022328.1
    Conserved Domains (2) summary
    pfam06428
    Location:174 → 242
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:267 → 459
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)
Nucleotide Protein
Heading Accession and Version

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