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FAM171A1 family with sequence similarity 171 member A1 [ Corvus cornix cornix ]

Gene ID: 104689345, updated on 12-Mar-2024

Summary

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Gene symbol
FAM171A1
Gene description
family with sequence similarity 171 member A1
See related
EnsemblRapid:ENSCCCG00025015274
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See FAM171A1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 2 NC_046333.1 (58401434..58490747, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959429.1 (38673391..38763718, complement)

Chromosome 2 - NC_046333.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P/MRP subunit p38 Neighboring gene N-myristoyltransferase 2 Neighboring gene uncharacterized LOC104689205 Neighboring gene integrin subunit alpha 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stress fiber assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM171A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046333.1 Reference ASM73873v5 Primary Assembly

    Range
    58401434..58490747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039548759.1 → XP_039404693.1  protein FAM171A1

    Related
    ENSCCCP00025026359.1, ENSCCCT00025031622.1
    Conserved Domains (1) summary
    pfam10577
    Location:33 → 893
    UPF0560; Uncharacterized protein family UPF0560
Nucleotide Protein
Heading Accession and Version

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