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THNSL1 threonine synthase like 1 [ Corvus cornix cornix ]

Gene ID: 104689233, updated on 12-Mar-2024

Summary

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Gene symbol
THNSL1
Gene description
threonine synthase like 1
See related
EnsemblRapid:ENSCCCG00025003241
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 2 NC_046333.1 (17110637..17130327, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959429.1 (42905604..42925003)

Chromosome 2 - NC_046333.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109144502 Neighboring gene G protein-coupled receptor 158 Neighboring gene enkurin, TRPC channel interacting protein Neighboring gene phosphoribosyl transferase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine synthase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046333.1 Reference ASM73873v5 Primary Assembly

    Range
    17110637..17130327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039548503.1 → XP_039404437.1  threonine synthase-like 1 isoform X1

    Conserved Domains (2) summary
    cd01560
    Location:272 → 716
    Thr-synth_2; Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, ...
    cd00464
    Location:77 → 225
    SK; Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis ...

  2. XM_039548504.1 → XP_039404438.1  threonine synthase-like 1 isoform X1

    Related
    ENSCCCP00025005964.1, ENSCCCT00025006580.1
    Conserved Domains (2) summary
    cd01560
    Location:272 → 716
    Thr-synth_2; Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, ...
    cd00464
    Location:77 → 225
    SK; Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis ...

  3. XM_039548505.1 → XP_039404439.1  threonine synthase-like 1 isoform X3

    Conserved Domains (2) summary
    cd01560
    Location:246 → 690
    Thr-synth_2; Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, ...
    cd00464
    Location:51 → 199
    SK; Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis ...

  4. XM_019285789.3 → XP_019141334.1  threonine synthase-like 1 isoform X2

    Related
    ENSCCCP00025005955.1, ENSCCCT00025006570.1

  5. XM_039548502.1 → XP_039404436.1  threonine synthase-like 1 isoform X1

    Conserved Domains (2) summary
    cd01560
    Location:272 → 716
    Thr-synth_2; Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, ...
    cd00464
    Location:77 → 225
    SK; Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis ...
Nucleotide Protein
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