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CD47 CD47 molecule [ Corvus cornix cornix ]

Gene ID: 104687007, updated on 12-Mar-2024

Summary

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Gene symbol
CD47
Gene description
CD47 molecule
See related
EnsemblRapid:ENSCCCG00025004048
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 1 NC_046332.1 (18459291..18481280)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959353.1 (3645800..3662696)

Chromosome 1 - NC_046332.1Genomic Context describing neighboring genes Neighboring gene myosin heavy chain 15 Neighboring gene HHLA2 member of B7 family Neighboring gene intraflagellar transport 57 Neighboring gene BBX high mobility group box domain containing Neighboring gene uncharacterized LOC109144145

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thrombospondin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leukocyte surface antigen CD47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046332.1 Reference ASM73873v5 Primary Assembly

    Range
    18459291..18481280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039557631.1 → XP_039413565.1  leukocyte surface antigen CD47 isoform X4

    Related
    ENSCCCP00025007403.1, ENSCCCT00025008377.1
    Conserved Domains (2) summary
    pfam04549
    Location:156 → 303
    CD47; CD47 transmembrane region
    cd16090
    Location:20 → 132
    IgV_CD47; Immunoglobulin variable region (IgV) in Cluster of Differentiation (CD) 47

  2. XM_039557623.1 → XP_039413557.1  leukocyte surface antigen CD47 isoform X3

    Related
    ENSCCCP00025007417.1, ENSCCCT00025008391.1
    Conserved Domains (2) summary
    pfam04549
    Location:156 → 303
    CD47; CD47 transmembrane region
    cd16090
    Location:20 → 132
    IgV_CD47; Immunoglobulin variable region (IgV) in Cluster of Differentiation (CD) 47

  3. XM_039557637.1 → XP_039413571.1  leukocyte surface antigen CD47 isoform X5

    Related
    ENSCCCP00025007386.1, ENSCCCT00025008356.1
    Conserved Domains (2) summary
    pfam04549
    Location:143 → 290
    CD47; CD47 transmembrane region
    cd16090
    Location:20 → 132
    IgV_CD47; Immunoglobulin variable region (IgV) in Cluster of Differentiation (CD) 47

  4. XM_039557614.1 → XP_039413548.1  leukocyte surface antigen CD47 isoform X2

    Related
    ENSCCCP00025007376.1, ENSCCCT00025008343.1
    Conserved Domains (2) summary
    pfam04549
    Location:156 → 303
    CD47; CD47 transmembrane region
    cd16090
    Location:20 → 132
    IgV_CD47; Immunoglobulin variable region (IgV) in Cluster of Differentiation (CD) 47

  5. XM_039557610.1 → XP_039413544.1  leukocyte surface antigen CD47 isoform X1

    Related
    ENSCCCP00025007392.1, ENSCCCT00025008365.1
    Conserved Domains (2) summary
    pfam04549
    Location:156 → 303
    CD47; CD47 transmembrane region
    cd16090
    Location:20 → 132
    IgV_CD47; Immunoglobulin variable region (IgV) in Cluster of Differentiation (CD) 47
Nucleotide Protein
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