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TRAPPC2 trafficking protein particle complex subunit 2 [ Corvus cornix cornix ]

Gene ID: 104686155, updated on 12-Mar-2024

Summary

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Gene symbol
TRAPPC2
Gene description
trafficking protein particle complex subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 1 NC_046332.1 (100096367..100102319, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959319.1 (29766790..29772512, complement)

Chromosome 1 - NC_046332.1Genomic Context describing neighboring genes Neighboring gene transcription elongation factor A N-terminal and central domain containing Neighboring gene RAB9A, member RAS oncogene family Neighboring gene OFD1 centriole and centriolar satellite protein Neighboring gene glycoprotein M6B Neighboring gene gem nuclear organelle associated protein 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 2
Names
trafficking protein particle complex 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046332.1 Reference ASM73873v5 Primary Assembly

    Range
    100096367..100102319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039550693.1 → XP_039406627.1  trafficking protein particle complex subunit 2

    Conserved Domains (1) summary
    cd14825
    Location:4 → 138
    TRAPPC2_sedlin; Trafficking protein particle complex subunit 2

  2. XM_039550666.1 → XP_039406600.1  trafficking protein particle complex subunit 2

    Conserved Domains (1) summary
    cd14825
    Location:4 → 138
    TRAPPC2_sedlin; Trafficking protein particle complex subunit 2

  3. XM_019282737.3 → XP_019138282.1  trafficking protein particle complex subunit 2

    Conserved Domains (1) summary
    cd14825
    Location:4 → 138
    TRAPPC2_sedlin; Trafficking protein particle complex subunit 2

  4. XM_019282736.3 → XP_019138281.1  trafficking protein particle complex subunit 2

    Conserved Domains (1) summary
    cd14825
    Location:4 → 138
    TRAPPC2_sedlin; Trafficking protein particle complex subunit 2

  5. XM_010394406.4 → XP_010392708.1  trafficking protein particle complex subunit 2

    See identical proteins and their annotated locations for XP_010392708.1

    Conserved Domains (1) summary
    cd14825
    Location:4 → 138
    TRAPPC2_sedlin; Trafficking protein particle complex subunit 2
Nucleotide Protein
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