U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GGPS1 geranylgeranyl diphosphate synthase 1 [ Corvus cornix cornix ]

Gene ID: 104684288, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GGPS1
Gene description
geranylgeranyl diphosphate synthase 1
See related
EnsemblRapid:ENSCCCG00025005798
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 3 NC_047056.1 (44520212..44542316)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959253.1 (1131908..1153416, complement)

Chromosome 3 - NC_047056.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 34 Neighboring gene AT-rich interaction domain 4B Neighboring gene tubulin folding cofactor E Neighboring gene beta-1,3-N-acetylgalactosaminyltransferase 2 Neighboring gene G protein subunit gamma 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
geranylgeranyl pyrophosphate synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_047056.1 Reference ASM73873v5 Primary Assembly

    Range
    44520212..44542316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039568147.1 → XP_039424081.1  geranylgeranyl pyrophosphate synthase isoform X1

    Conserved Domains (1) summary
    pfam00348
    Location:9 → 250
    polyprenyl_synt; Polyprenyl synthetase

  2. XM_010391526.4 → XP_010389828.1  geranylgeranyl pyrophosphate synthase isoform X1

    Related
    ENSCCCP00025010329.1, ENSCCCT00025012000.1
    Conserved Domains (1) summary
    pfam00348
    Location:9 → 250
    polyprenyl_synt; Polyprenyl synthetase

  3. XM_019281268.3 → XP_019136813.1  geranylgeranyl pyrophosphate synthase isoform X1

    Conserved Domains (1) summary
    pfam00348
    Location:9 → 250
    polyprenyl_synt; Polyprenyl synthetase

  4. XM_039568148.1 → XP_039424082.1  geranylgeranyl pyrophosphate synthase isoform X2

    Conserved Domains (1) summary
    pfam00348
    Location:1 → 197
    polyprenyl_synt; Polyprenyl synthetase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.