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SEC61A1 SEC61 translocon subunit alpha 1 [ Corvus cornix cornix ]

Gene ID: 104683473, updated on 12-Mar-2024

Summary

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Gene symbol
SEC61A1
Gene description
SEC61 translocon subunit alpha 1
See related
EnsemblRapid:ENSCCCG00025009326
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 12 NC_046342.1 (9396319..9408555, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959104.1 (6172355..6184208, complement)

Chromosome 12 - NC_046342.1Genomic Context describing neighboring genes Neighboring gene eukaryotic elongation factor, selenocysteine-tRNA specific Neighboring gene RuvB like AAA ATPase 1 Neighboring gene uncharacterized LOC109143351 Neighboring gene kelch repeat and BTB domain containing 12 Neighboring gene monoglyceride lipase Neighboring gene uncharacterized LOC120410667

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signal sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec61 translocon complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha
Names
SEC61 translocon alpha 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046342.1 Reference ASM73873v5 Primary Assembly

    Range
    9396319..9408555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039559066.1 → XP_039415000.1  LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha

    Related
    ENSCCCP00025016217.1, ENSCCCT00025019220.1
    Conserved Domains (1) summary
    PTZ00219
    Location:40 → 512
    PTZ00219; Sec61 alpha subunit; Provisional
Nucleotide Protein
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