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COL1A2 collagen type I alpha 2 chain [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104682783, updated on 12-Mar-2024

Summary

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Gene symbol
COL1A2
Gene description
collagen type I alpha 2 chain
See related
Ensembl:ENSRROG00000044053
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
52
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 6 NC_044554.1 (124229977..124266891)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010828916.1 (359552..396301, complement)

Chromosome 6 - NC_044554.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104682785 Neighboring gene Bet1 golgi vesicular membrane trafficking protein Neighboring gene emerin Neighboring gene CAS1 domain containing 1 Neighboring gene sarcoglycan epsilon Neighboring gene paternally expressed 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-2(I) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044554.1 Reference ASM756505v1 Primary Assembly

    Range
    124229977..124266891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010389521.2 → XP_010387823.1  collagen alpha-2(I) chain

    UniProtKB/TrEMBL
    A0A2K6RL92
    Related
    ENSRROP00000041793.1
    Conserved Domains (3) summary
    pfam01391
    Location:115 → 174
    Collagen; Collagen triple helix repeat (20 copies)
    PRK07764
    Location:513 → 722
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam01410
    Location:1131 → 1365
    COLFI; Fibrillar collagen C-terminal domain
Nucleotide Protein
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