U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CLIP1 CAP-Gly domain containing linker protein 1 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104666299, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CLIP1
Gene description
CAP-Gly domain containing linker protein 1
See related
Ensembl:ENSRROG00000034853
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
28
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 10 NC_044558.1 (83168606..83325444)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010808083.1 (5078584..5205459, complement)

Chromosome 10 - NC_044558.1Genomic Context describing neighboring genes Neighboring gene kinetochore associated 1 Neighboring gene arginine and serine rich coiled-coil 2 Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene VPS33A core subunit of CORVET and HOPS complexes Neighboring gene diablo IAP-binding mitochondrial protein Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CAP-Gly domain-containing linker protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044558.1 Reference ASM756505v1 Primary Assembly

    Range
    83168606..83325444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030938887.1 → XP_030794747.1  CAP-Gly domain-containing linker protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A2K6PZX9, A0A2K6PZY5
    Conserved Domains (3) summary
    COG1196
    Location:605 → 1250
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1370 → 1386
    CLIP1_ZNF; CLIP1 zinc knuckle

  2. XM_030938878.1 → XP_030794738.1  CAP-Gly domain-containing linker protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (3) summary
    COG1196
    Location:651 → 1349
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1418 → 1434
    CLIP1_ZNF; CLIP1 zinc knuckle

  3. XM_030938879.1 → XP_030794739.1  CAP-Gly domain-containing linker protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6PZX9, A0A2K6PZY0
    Conserved Domains (3) summary
    COG1196
    Location:651 → 1296
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1416 → 1432
    CLIP1_ZNF; CLIP1 zinc knuckle

  4. XM_030938885.1 → XP_030794745.1  CAP-Gly domain-containing linker protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (3) summary
    COG1196
    Location:370 → 1125
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1379 → 1395
    CLIP1_ZNF; CLIP1 zinc knuckle

  5. XM_030938881.1 → XP_030794741.1  CAP-Gly domain-containing linker protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K6PZX9, A0A2K6Q008
    Conserved Domains (3) summary
    COG1196
    Location:640 → 1285
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1405 → 1421
    CLIP1_ZNF; CLIP1 zinc knuckle

  6. XM_030938884.1 → XP_030794744.1  CAP-Gly domain-containing linker protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (4) summary
    COG1196
    Location:616 → 1314
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:344 → 683
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1383 → 1399
    CLIP1_ZNF; CLIP1 zinc knuckle

  7. XM_030938880.1 → XP_030794740.1  CAP-Gly domain-containing linker protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (3) summary
    COG1196
    Location:640 → 1338
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1407 → 1423
    CLIP1_ZNF; CLIP1 zinc knuckle

  8. XM_030938886.1 → XP_030794746.1  CAP-Gly domain-containing linker protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (3) summary
    COG1196
    Location:605 → 1303
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1372 → 1388
    CLIP1_ZNF; CLIP1 zinc knuckle

  9. XM_010368351.2 → XP_010366653.1  CAP-Gly domain-containing linker protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (3) summary
    COG1196
    Location:651 → 1349
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1418 → 1434
    CLIP1_ZNF; CLIP1 zinc knuckle

  10. XM_030938882.1 → XP_030794742.1  CAP-Gly domain-containing linker protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K6PZX9
    Conserved Domains (3) summary
    COG1196
    Location:640 → 1338
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:214 → 278
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:1407 → 1423
    CLIP1_ZNF; CLIP1 zinc knuckle
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.