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PAMR1 peptidase domain containing associated with muscle regeneration 1 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104658359, updated on 12-Mar-2024

Summary

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Gene symbol
PAMR1
Gene description
peptidase domain containing associated with muscle regeneration 1
See related
Ensembl:ENSRROG00000028590
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 15 NC_044563.1 (108887813..108992019)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010830541.1 (5119560..5228023, complement)

Chromosome 15 - NC_044563.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 44 Neighboring gene four-jointed box kinase 1 Neighboring gene solute carrier family 1 member 2 Neighboring gene uncharacterized LOC115893573 Neighboring gene CD44 molecule (IN blood group)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive serine protease PAMR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044563.1 Reference ASM756505v1 Primary Assembly

    Range
    108887813..108992019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010358395.2 → XP_010356697.1  inactive serine protease PAMR1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6NVI5, A0A2K6NVI8
    Related
    ENSRROP00000008280.1
    Conserved Domains (4) summary
    cd00033
    Location:280 → 343
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd00041
    Location:128 → 234
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:240 → 272
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00190
    Location:461 → 718
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  2. XM_010358394.2 → XP_010356696.1  inactive serine protease PAMR1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6NVI1, A0A2K6NVI8
    Related
    ENSRROP00000008283.1
    Conserved Domains (4) summary
    cd00033
    Location:297 → 360
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd00041
    Location:128 → 234
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:240 → 272
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00190
    Location:478 → 735
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein
Heading Accession and Version

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