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SIX3 SIX homeobox 3 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104656814, updated on 12-Mar-2024

Summary

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Gene symbol
SIX3
Gene description
SIX homeobox 3
See related
Ensembl:ENSRROG00000042657
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 17 NC_044565.1 (102936752..102941105, complement)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010830085.1 (1057999..1062350)

Chromosome 17 - NC_044565.1Genomic Context describing neighboring genes Neighboring gene SIX homeobox 2 Neighboring gene keratinocyte-associated protein 2-like Neighboring gene uncharacterized LOC104656812 Neighboring gene uncharacterized LOC104656811

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein SIX3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044565.1 Reference ASM756505v1 Primary Assembly

    Range
    102936752..102941105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010356524.2 → XP_010354826.1  homeobox protein SIX3

    See identical proteins and their annotated locations for XP_010354826.1

    UniProtKB/TrEMBL
    A0A2K6RBY7
    Related
    ENSRROP00000038557.1
    Conserved Domains (2) summary
    cd00086
    Location:208 → 256
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam16878
    Location:87 → 200
    SIX1_SD; Transcriptional regulator, SIX1, N-terminal SD domain
Nucleotide Protein
Heading Accession and Version

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