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LOC104648601 uncharacterized LOC104648601 [ Solanum lycopersicum (tomato) ]

Gene ID: 104648601, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104648601
Gene description
uncharacterized LOC104648601
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 8 NC_015445.3 (955971..961036)
102 previous assembly SL2.50 (GCF_000188115.3) 8 NC_015445.2 (955948..961004)

Chromosome 8 - NC_015445.3Genomic Context describing neighboring genes Neighboring gene copper transporter 6 Neighboring gene B3 domain-containing protein REM14 Neighboring gene fasciclin-like arabinogalactan protein 3 Neighboring gene fasciclin-like arabinogalactan protein 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC104648601

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015445.3 Reference SL3.0 Primary Assembly

    Range
    955971..961036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010326231.2 → XP_010324533.1  uncharacterized protein LOC104648601

    UniProtKB/TrEMBL
    K4CIB7
    Conserved Domains (3) summary
    cd10017
    Location:466 → 534
    B3_DNA; Plant-specific B3-DNA binding domain
    smart01019
    Location:136 → 230
    B3; B3 DNA binding domain
    cl15242
    Location:14 → 92
    BfiI_C_EcoRII_N_B3; DNA binding domains of BfiI, EcoRII and plant B3 proteins
Nucleotide Protein
Heading Accession and Version

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