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HP1BP3 heterochromatin protein 1 binding protein 3 [ Balearica regulorum gibbericeps (East African grey crowned-crane) ]

Gene ID: 104632577, updated on 12-Mar-2024

Summary

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Gene symbol
HP1BP3
Gene description
heterochromatin protein 1 binding protein 3
Locus tag
N312_05861
Gene type
protein coding
RefSeq status
MODEL
Organism
Balearica regulorum gibbericeps (sub-species: gibbericeps)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gruiformes; Gruidae; Balearica
Orthologs
human mouse all
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Genomic context

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See HP1BP3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70989v1 (GCF_000709895.1) Unplaced Scaffold NW_010745058.1 (7769..21188)

NW_010745058.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010745058.1 Unplaced Scaffold Reference ASM70989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterochromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterochromatin protein 1-binding protein 3
Names
Heterochromatin protein 1-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balearica regulorum gibbericeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70989v1 Primary Assembly

Genomic

  1. NW_010745058.1 Reference ASM70989v1 Primary Assembly

    Range
    7769..21188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010298478.1 → XP_010296780.1  heterochromatin protein 1-binding protein 3

    UniProtKB/TrEMBL
    A0A087V8M2
    Conserved Domains (3) summary
    cd00073
    Location:155 → 246
    H15; linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated ...
    pfam00538
    Location:342 → 422
    Linker_histone; linker histone H1 and H5 family
    pfam14721
    Location:57 → 106
    AIF_C; Apoptosis-inducing factor, mitochondrion-associated, C-term
Nucleotide Protein
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