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DET1 DET1 partner of COP1 E3 ubiquitin ligase [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104628750, updated on 11-Apr-2024

Summary

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Gene symbol
DET1
Gene description
DET1 partner of COP1 E3 ubiquitin ligase
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes; Phaethontidae; Phaethon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010520561.1 (627..11257)

NW_010520561.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010520561.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like ligase-substrate adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cullin-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DET1 homolog
Names
DET1, COP1 ubiquitin ligase partner
de-etiolated homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010520561.1 Reference ASM68728v1

    Range
    627..11257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010297428.1 → XP_010295730.1  DET1 homolog isoform X1

    See identical proteins and their annotated locations for XP_010295730.1

    Conserved Domains (1) summary
    pfam09737
    Location:142 → 547
    Det1; De-etiolated protein 1 Det1

  2. XM_010297429.1 → XP_010295731.1  DET1 homolog isoform X2

    Conserved Domains (1) summary
    pfam09737
    Location:142 → 488
    Det1; De-etiolated protein 1 Det1
Nucleotide Protein
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