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ATP9B ATPase phospholipid transporting 9B (putative) [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104628169, updated on 12-Mar-2024

Summary

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Gene symbol
ATP9B
Gene description
ATPase phospholipid transporting 9B (putative)
Locus tag
N335_09884
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes; Phaethontidae; Phaethon
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010518308.1 (4275..102342, complement)

NW_010518308.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010518308.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IIB
Names
putative phospholipid-transporting ATPase IIB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010518308.1 Reference ASM68728v1

    Range
    4275..102342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010296671.1 → XP_010294973.1  probable phospholipid-transporting ATPase IIB

    UniProtKB/TrEMBL
    A0A091U8L6
    Conserved Domains (5) summary
    cd01427
    Location:481 → 631
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    pfam00122
    Location:67 → 166
    E1-E2_ATPase; E1-E2 ATPase
    pfam00702
    Location:405 → 626
    Hydrolase; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:311 → 400
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16212
    Location:640 → 879
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
Nucleotide Protein
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